Curated BLAST for Genomes

 

Curated BLAST

Searching in Beijerinckia indica subsp. indica ATCC 9039 (GCF_000019845.1)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Beijerinckia indica subsp. indica ATCC 9039, or try another query

BIND_RS14385 Bind_2852 WP_012385772.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

76% id,
97% cov

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

73% id,
97% cov

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

65% id,
98% cov

More...

BIND_RS16960 Bind_3342 WP_012386248.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

54% id,
92% cov

AL2C4_ARATH / Q56YU0: Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana

37% id,
96% cov

Q8BH00: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

37% id,
94% cov

More...

BIND_RS09220 Bind_1820 WP_012384805.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

41% id,
99% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

39% id,
97% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

34% id,
93% cov

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BIND_RS00210 Bind_0041 WP_012383058.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

43% id,
95% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

41% id,
97% cov

AL2C4_ARATH / Q56YU0: Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana

41% id,
94% cov

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BIND_RS00085 Bind_0016 WP_012383033.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH3_BACSU / P46329: Putative aldehyde dehydrogenase AldX; EC 1.2.1.3 from Bacillus subtilis

40% id,
99% cov

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

40% id,
95% cov

AL3A2_MOUSE / P47740: Aldehyde dehydrogenase family 3 member A2; Aldehyde dehydrogenase 3; Fatty aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.94 from Mus musculus
P47740: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

40% id,
91% cov

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BIND_RS03950 Bind_0775 WP_012383782.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

40% id,
99% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

40% id,
97% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

34% id,
91% cov

More...

BIND_RS14275 Bind_2831 WP_012385751.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

42% id,
89% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

36% id,
95% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

35% id,
96% cov

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BIND_RS18595 Bind_3657 WP_012386557.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

38% id,
98% cov

BIND_RS00885 Bind_0175 WP_012383190.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

34% id,
98% cov

ALDH1_ELEED / Q28399: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ETA-crystallin; EC 1.2.1.3 from Elephantulus edwardii

33% id,
98% cov

Q9CZS1: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

34% id,
96% cov

More...

BIND_RS03185 Bind_0618 WP_012383626.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

33% id,
96% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

32% id,
99% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

33% id,
94% cov

More...

BIND_RS14420 Bind_2859 WP_202944758.1: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

30% id,
96% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

28% id,
100% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

30% id,
95% cov

More...

putA BIND_RS14180 Bind_2812 WP_012385732.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

30% id,
94% cov

Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

29% id,
97% cov

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

31% id,
87% cov

More...

BIND_RS13295 Bind_2633 WP_012385568.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

28% id,
92% cov

BIND_RS05650 Bind_1113 WP_041777951.1: type I polyketide synthase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

27% id,
62% cov

BIND_RS00880 Bind_0174 WP_012383189.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

33% id,
45% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

33% id,
45% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

31% id,
44% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3797230-3798810 (frame -1) on NC_010581.1 Beijerinckia indica subsp. indica ATCC 9039, complete sequence
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus
Also see hits to annotated proteins above

51% id,
99% cov

AL2B7_ARATH / Q8S528: Aldehyde dehydrogenase family 2 member B7, mitochondrial; ALDH2b; EC 1.2.1.3 from Arabidopsis thaliana
Also see hits to annotated proteins above

35% id,
94% cov

AL1A1_MACFA / Q8HYE4: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Macaca fascicularis
Also see hits to annotated proteins above

34% id,
97% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory