Curated BLAST for Genomes

 

Curated BLAST

Searching in Beijerinckia indica subsp. indica ATCC 9039 (GCF_000019845.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.13' as complete word(s).

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Beijerinckia indica subsp. indica ATCC 9039, or try another query

rocD BIND_RS14190 Bind_2814 WP_012385734.1: ornithine--oxo-acid transaminase
is similar to:		 PaperBLAST

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 52% id,
98% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 48% id,
97% cov

Q3ZCF5: ornithine aminotransferase (EC 2.6.1.13) from Bos taurus

 49% id,
91% cov

More...

BIND_RS00765 Bind_0150 WP_012383166.1: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 46% id,
95% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 36% id,
93% cov

OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans
otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans

 34% id,
89% cov

More...

BIND_RS16295 Bind_3215 WP_012386123.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum
Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum

 37% id,
90% cov

Q3ZCF5: ornithine aminotransferase (EC 2.6.1.13) from Bos taurus

 37% id,
84% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 34% id,
93% cov

More...

BIND_RS04145 Bind_0815 WP_012383822.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 30% id,
99% cov

OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

 28% id,
94% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 27% id,
94% cov

More...

BIND_RS13140 Bind_2601 WP_012385547.1: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis

 36% id,
82% cov

OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum
Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum

 33% id,
90% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 39% id,
77% cov

More...

BIND_RS06310 Bind_1242 WP_012384241.1: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

 31% id,
91% cov

OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

 28% id,
100% cov

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 29% id,
97% cov

More...

BIND_RS00595 Bind_0117 WP_012383133.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 25% id,
97% cov

ORNAT_PYRHO / O50131: Ornithine aminotransferase; Orn-AT; Ornithine delta-aminotransferase; EC 2.6.1.13 from Pyrococcus horikoshii

 26% id,
90% cov

S8EY38: ornithine aminotransferase (EC 2.6.1.13) from Toxoplasma gondii

 26% id,
89% cov

More...

BIND_RS04305 Bind_0846 WP_012383853.1: hybrid non-ribosomal peptide synthetase/type I polyketide synthase
is similar to:		 PaperBLAST

B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum

 24% id,
86% cov

OAT_ARATH / Q9FNK4: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Arabidopsis thaliana
δ-OAT / Q9FNK4: ornithine-δ-aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana
Q9FNK4: ornithine aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana

 25% id,
77% cov

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

 26% id,
76% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory