Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Beijerinckia indica subsp. indica ATCC 9039 (GCF_000019845.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Beijerinckia indica subsp. indica ATCC 9039, or try another query

BIND_RS18300 Bind_3600 WP_012386503.1: amino acid aminotransferase is similar to:	PaperBLAST
TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli	48% id, 100% cov

BIND_RS18020 Bind_3545 WP_012386450.1: branched-chain amino acid aminotransferase is similar to:	PaperBLAST
BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans	42% id, 86% cov
ilvE / O27481: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus	37% id, 96% cov
F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis	36% id, 96% cov
N515DRAFT_2015: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Dyella japonica	38% id, 91% cov
Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri	40% id, 86% cov
ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa	39% id, 88% cov
IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli ilvE / RF\|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli	40% id, 86% cov
B9L0B7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermomicrobium roseum	34% id, 92% cov
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	32% id, 95% cov
F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia	35% id, 82% cov
D1CCW1: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermobaculum terrenum	32% id, 89% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	31% id, 91% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	33% id, 87% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	32% id, 87% cov
P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.	28% id, 86% cov
ILVE2_BACSU / P39576: Branched-chain-amino-acid aminotransferase 2; BCAT 2; Vegetative protein 85; VEG85; EC 2.6.1.42 from Bacillus subtilis ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis	29% id, 74% cov
BCAT2_RAT / O35854: Branched-chain-amino-acid aminotransferase, mitochondrial; BCAT(m); EC 2.6.1.42 from Rattus norvegicus	28% id, 73% cov
A0A0A0LN48: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	32% id, 31% cov
BCAT_CAEEL / P54688: Branched-chain-amino-acid aminotransferase, cytosolic; BCAT; ECA39 protein; EC 2.6.1.42 from Caenorhabditis elegans	29% id, 26% cov
More...

BIND_RS07730 Bind_1524 WP_012384514.1: D-amino-acid transaminase is similar to:	PaperBLAST
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	33% id, 95% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	32% id, 93% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	32% id, 93% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	32% id, 94% cov
ilvE / O27481: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus	29% id, 92% cov
ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa	28% id, 93% cov
Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri	27% id, 93% cov
B9L0B7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermomicrobium roseum	27% id, 89% cov
Q9LE06: branched-chain-amino-acid transaminase (EC 2.6.1.42); methionine transaminase (EC 2.6.1.88) from Arabidopsis thaliana	24% id, 75% cov
A0A0A0LJI6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	30% id, 50% cov
Q5FTR3: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Gluconobacter oxydans	30% id, 39% cov
BCAT1_HUMLU / K7QKH1: Branched-chain amino acid aminotransferase 1, mitochondrial; HlBCAT1; EC 2.6.1.42 from Humulus lupulus	27% id, 33% cov
More...

BIND_RS00395 Bind_0079 WP_012383096.1: pyridoxal phosphate-dependent aminotransferase is similar to:	PaperBLAST
A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.	23% id, 84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory