Curated BLAST for Genomes

 

Curated BLAST

Searching in Beijerinckia indica subsp. indica ATCC 9039 (GCF_000019845.1)

Found 36 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Beijerinckia indica subsp. indica ATCC 9039, or try another query

glpK BIND_RS01930 Bind_0380 WP_012383391.1: glycerol kinase GlpK
is similar to:
PaperBLAST

P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis

65% id,
97% cov

D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.

59% id,
100% cov

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

53% id,
99% cov

More...

xylB BIND_RS12460 Bind_2464 WP_012385426.1: xylulokinase
is similar to:
PaperBLAST

P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.

30% id,
91% cov

GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis

26% id,
93% cov

Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens

23% id,
87% cov

xylB BIND_RS00895 Bind_0177 WP_012383192.1: xylulokinase
is similar to:
PaperBLAST

GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis
O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis

24% id,
96% cov

A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae

26% id,
89% cov

PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae

25% id,
88% cov

More...

xylB BIND_RS19310 Bind_3807 WP_012382961.1: xylulokinase
is similar to:
PaperBLAST

GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis

24% id,
89% cov

Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens

22% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory