Curated BLAST for Genomes

 

Curated BLAST

Searching in Beijerinckia indica subsp. indica ATCC 9039 (GCF_000019845.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Beijerinckia indica subsp. indica ATCC 9039, or try another query

BIND_RS03655 Bind_0713 WP_012383720.1: dihydroorotase
is similar to:
PaperBLAST

A0A3E2N0G4: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Mycobacterium marinum

41% id,
15% cov

Q8Y5F6: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes

36% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory