Curated BLAST for Genomes

 

Curated BLAST

Searching in Beijerinckia indica subsp. indica ATCC 9039 (GCF_000019845.1)

Found 3 curated entries in PaperBLAST's database that match 'N-succinylcitrulline desuccinylase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Beijerinckia indica subsp. indica ATCC 9039, or try another query

argE BIND_RS05275 Bind_1040 WP_012384040.1: acetylornithine deacetylase
is similar to:
PaperBLAST

CA265_RS18500: N-succinylcitrulline desuccinylase (EC 3.5.1.-) from Pedobacter sp.

24% id,
94% cov

Echvi_3851: N-succinylcitrulline desuccinylase (EC 3.5.1.-) from Echinicola vietnamensis

26% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory