Curated BLAST for Genomes

 

Curated BLAST

Searching in Nostoc punctiforme PCC 73102 ATCC 29133; PCC 73102 (GCF_000020025.1)

Found 63 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Nostoc punctiforme PCC 73102 ATCC 29133; PCC 73102, or try another query

NPUN_RS17345 Npun_R3430 WP_012409815.1: type I polyketide synthase
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator

23% id,
74% cov

Q0K368: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Cupriavidus necator

23% id,
56% cov

PfGW456L13_2411: Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pseudomonas fluorescens

25% id,
45% cov

More...

NPUN_RS14490 Npun_R2847 WP_012409371.1: pitrilysin family protein
is similar to:
PaperBLAST

P07256: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Zoogloea ramigera

22% id,
75% cov

NPUN_RS15370 Npun_R3024 WP_012409513.1: type I polyketide synthase
is similar to:
PaperBLAST

fadA / Q88L01: FadA (EC 2.3.1.16; EC 2.3.1.9) from Pseudomonas putida

31% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4291420-4294356 (frame -1) on NC_010628.1 Nostoc punctiforme PCC 73102, complete sequence
is similar to:
PaperBLAST

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

32% id,
25% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory