Curated BLAST for Genomes

 

Curated BLAST

Searching in Nostoc punctiforme PCC 73102 ATCC 29133; PCC 73102 (GCF_000020025.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Nostoc punctiforme PCC 73102 ATCC 29133; PCC 73102, or try another query

NPUN_RS25070 Npun_R4958 WP_012411258.1: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

 44% id,
99% cov

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

 45% id,
97% cov

HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens

 44% id,
99% cov

More...

NPUN_RS09825 Npun_F1941 WP_012408608.1: acetyl ornithine aminotransferase family protein
is similar to:		 PaperBLAST

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

 39% id,
90% cov

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa

 36% id,
97% cov

Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis

 36% id,
97% cov

More...

hemL NPUN_RS20670 Npun_R4096 WP_012410441.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:		 PaperBLAST

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

 35% id,
84% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

 35% id,
84% cov

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

 38% id,
69% cov

More...

NPUN_RS17425 Npun_R3446 WP_012409829.1: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

 31% id,
94% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

 29% id,
90% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

 28% id,
90% cov

More...

NPUN_RS33540 Npun_R6590 WP_012412784.1: type I polyketide synthase
is similar to:		 PaperBLAST

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

 29% id,
82% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

 29% id,
82% cov

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

 31% id,
77% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory