Curated BLAST for Genomes

 

Curated BLAST

Searching in Nostoc punctiforme PCC 73102 ATCC 29133; PCC 73102 (GCF_000020025.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Nostoc punctiforme PCC 73102 ATCC 29133; PCC 73102, or try another query

asnB NPUN_RS06985 Npun_F1373 WP_012408102.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:
PaperBLAST

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

33% id,
97% cov

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

34% id,
63% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

36% id,
59% cov

More...

NPUN_RS09405 Npun_R1857 WP_012408530.1: asparagine synthase-related protein
is similar to:
PaperBLAST

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

29% id,
51% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

31% id,
48% cov

E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster

32% id,
21% cov

More...

NPUN_RS09385 Npun_R1853 WP_012408526.1: asparagine synthetase B family protein
is similar to:
PaperBLAST

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

29% id,
42% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

28% id,
40% cov

Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

27% id,
34% cov

More...

glmS NPUN_RS26365 Npun_F5214 WP_012411496.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

26% id,
31% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

35% id,
10% cov

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

38% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory