Searching in Paraburkholderia phymatum STM815 (GCF_000020045.1)
Found 17 curated entries in PaperBLAST's database that match '3.1.1.25' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Paraburkholderia phymatum STM815, or try another query
| BPHY_RS18670 Bphy_3696 WP_012403004.1: SMP-30/gluconolactonase/LRE family protein is similar to: | PaperBLAST |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 35% id, 96% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 34% id, 91% cov |
| BPHY_RS13245 Bphy_2611 WP_012401985.1: SMP-30/gluconolactonase/LRE family protein is similar to: | PaperBLAST |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 37% id, 90% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 31% id, 92% cov |
| BPHY_RS28970 Bphy_5790 WP_012405016.1: N-acyl homoserine lactonase family protein is similar to: | PaperBLAST |
P0CJ63: 1,4-lactonase (EC 3.1.1.25); quorum-quenching N-acyl-homoserine lactonase (EC 3.1.1.81) from Bacillus thuringiensis | 25% id, 70% cov |
| BPHY_RS22345 Bphy_4442 WP_012403729.1: SMP-30/gluconolactonase/LRE family protein is similar to: | PaperBLAST |
B2LYJ5: 1,4-lactonase (EC 3.1.1.25) from Fusarium proliferatum | 31% id, 49% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2949625-2951223 (frame -1) on NC_010622.1 Paraburkholderia phymatum STM815 chromosome 1, complete sequence is similar to: | PaperBLAST |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 35% id, 96% cov |
Lawrence Berkeley National Laboratory