Searching in Paraburkholderia phymatum STM815 (GCF_000020045.1)
Found 10 curated entries in PaperBLAST's database that match '4.2.1.6' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 17 relevant proteins in Paraburkholderia phymatum STM815, or try another query
| dgoD BPHY_RS02165 Bphy_0433 WP_012399852.1: galactonate dehydratase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 95% id, 100% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 63% id, 100% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 51% id, 100% cov |
| BPHY_RS17490 Bphy_3451 WP_012402777.1: IlvD/Edd family dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 66% id, 99% cov |
| BPHY_RS33425 Bphy_6714 WP_012405897.1: IlvD/Edd family dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 65% id, 98% cov |
| BPHY_RS21210 Bphy_4215 WP_012403509.1: IlvD/Edd family dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 63% id, 99% cov |
| araD BPHY_RS22370 Bphy_4447 WP_012403734.1: L-arabinonate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 51% id, 99% cov |
| araD BPHY_RS26940 Bphy_5385 WP_012404627.1: L-arabinonate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 48% id, 98% cov |
| BPHY_RS18660 Bphy_3694 WP_012403002.1: IlvD/Edd family dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 46% id, 100% cov |
| BPHY_RS30750 Bphy_6168 WP_012405378.1: IlvD/Edd family dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 43% id, 100% cov |
| ilvD BPHY_RS11300 Bphy_2221 WP_012401602.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 37% id, 96% cov |
| BPHY_RS33585 Bphy_6746 WP_012405926.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 31% id, 90% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 29% id, 94% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 27% id, 90% cov |
| BPHY_RS35945 Bphy_7246 WP_012406400.1: enolase C-terminal domain-like protein is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 30% id, 84% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 24% id, 88% cov |
| rhmD BPHY_RS17570 Bphy_3468 WP_012402794.1: L-rhamnonate dehydratase is similar to: | PaperBLAST |
GAD_PICTO / Q6L1T2: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus | 27% id, 85% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 32% id, 70% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 30% id, 71% cov |
| BPHY_RS31790 Bphy_6388 WP_012405578.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 26% id, 85% cov |
| BPHY_RS20300 Bphy_4029 WP_012403325.1: muconate/chloromuconate family cycloisomerase is similar to: | PaperBLAST |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 24% id, 90% cov |
| ilvD BPHY_RS25230 Bphy_5037 WP_012404290.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 33% id, 58% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 33% id, 51% cov |
| gudD BPHY_RS32515 Bphy_6530 WP_012405717.1: glucarate dehydratase is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 22% id, 86% cov |
| BPHY_RS28035 Bphy_5599 WP_012404834.1: L-fuconate dehydratase is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 21% id, 84% cov |
GAD_PICTO / Q6L1T2: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus | 23% id, 71% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 16 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory