Searching in Trichlorobacter lovleyi SZ (GCF_000020385.1)
Found 58 curated entries in PaperBLAST's database that match '1.1.1.25' as complete word(s).
These curated entries have 42 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Trichlorobacter lovleyi SZ, or try another query
| aroE GLOV_RS08200 Glov_1652 WP_012469710.1: shikimate dehydrogenase is similar to: | PaperBLAST |
AROE_GEOKA / Q5KWX7: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Geobacillus kaustophilus | 42% id, 93% cov |
AROE_METJA / Q58484: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Methanocaldococcus jannaschii | 39% id, 98% cov |
CCNA_00003: shikimate dehydrogenase (EC 1.1.1.25) from Caulobacter crescentus | 40% id, 93% cov |
| hemA GLOV_RS02435 Glov_0503 WP_012468587.1: glutamyl-tRNA reductase is similar to: | PaperBLAST |
CCNA_00003: shikimate dehydrogenase (EC 1.1.1.25) from Caulobacter crescentus | 31% id, 37% cov |
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae | 34% id, 29% cov |
A0A0A0LQ48: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Cucumis sativus | 36% id, 18% cov |
| aroB GLOV_RS07870 Glov_1592 WP_012469650.1: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 38% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 47% id, 11% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 30% id, 10% cov |
| GLOV_RS17510 Glov_3541 WP_012471560.1: flavocytochrome c is similar to: | PaperBLAST |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 25% id, 29% cov |
| GLOV_RS03870 Glov_0789 WP_012468871.1: AroB-related putative sugar phosphate phospholyase (cyclizing) is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 31% id, 18% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 27% id, 19% cov |
| GLOV_RS15295 Glov_3097 WP_012471128.1: shikimate kinase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 25% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory