Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichlorobacter lovleyi SZ (GCF_000020385.1)

Found 6 curated entries in PaperBLAST's database that match '1.1.99.2' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Trichlorobacter lovleyi SZ, or try another query

lhgO GLOV_RS12590 Glov_2542 WP_012470588.1: L-2-hydroxyglutarate oxidase
is similar to:
PaperBLAST

L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Indibacter alkaliphilus

33% id,
99% cov

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) from Homo sapiens

33% id,
88% cov

L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis

35% id,
70% cov

More...

GLOV_RS13305 Glov_2687 WP_012470730.1: glycerol-3-phosphate dehydrogenase/oxidase
is similar to:
PaperBLAST

L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis

42% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory