Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichlorobacter lovleyi SZ (GCF_000020385.1)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Trichlorobacter lovleyi SZ, or try another query

pta GLOV_RS05950 Glov_1210 WP_012469280.1: phosphate acetyltransferase
is similar to:
PaperBLAST

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

51% id,
99% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

51% id,
98% cov

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

51% id,
99% cov

More...

GLOV_RS06215 Glov_1262 WP_012469332.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

41% id,
98% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Acetivibrio thermocellus

40% id,
98% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

39% id,
99% cov

More...

GLOV_RS18075 Glov_3655 WP_012471673.1: cobyrinate a,c-diamide synthase
is similar to:
PaperBLAST

PTA_SALTY / Q8ZND6: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.222; EC 2.3.1.8 from Salmonella typhimurium
Q8ZND6: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

22% id,
36% cov

PTA_ECOLI / P0A9M8: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Escherichia coli
Pta / b2297: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli
pta / P0A9M8: phosphate acetyltransferase (EC 2.3.1.8; EC 2.3.1.222) from Escherichia coli
P0A9M8: phosphate acetyltransferase (EC 2.3.1.8) from Escherichia coli

22% id,
34% cov

PTA_PSEAE / Q9I5A5: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Pseudomonas aeruginosa

35% id,
15% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory