Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichlorobacter lovleyi SZ (GCF_000020385.1)

Found 39 curated entries in PaperBLAST's database that match '2.6.1.57' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Trichlorobacter lovleyi SZ, or try another query

GLOV_RS08775 Glov_1768 WP_012469824.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

38% id,
99% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

36% id,
99% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

36% id,
97% cov

More...

hisC GLOV_RS11925 Glov_2405 WP_012470454.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

35% id,
98% cov

GLOV_RS12865 Glov_2600 WP_012470645.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

32% id,
100% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

31% id,
100% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

30% id,
91% cov

More...

hisC GLOV_RS04030 Glov_0823 WP_012468904.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

31% id,
90% cov

GLOV_RS15020 Glov_3040 WP_012471071.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

29% id,
93% cov

GLOV_RS02190 Glov_0455 WP_012468539.1: aminotransferase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

27% id,
98% cov

Q9C969: aromatic-amino-acid transaminase (EC 2.6.1.57) from Arabidopsis thaliana

29% id,
90% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

26% id,
98% cov

GLOV_RS18195 Glov_3679 WP_012471696.1: cobyric acid synthase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

27% id,
95% cov

GLOV_RS14725 Glov_2977 WP_012471008.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

28% id,
93% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

26% id,
95% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

25% id,
92% cov

GLOV_RS17580 Glov_3554 WP_012471573.1: cobyric acid synthase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

27% id,
95% cov

GLOV_RS16070 Glov_3249 WP_012471279.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ArAT1 / D7F4K3: aromatic amino acid transaminase (EC 2.6.1.1; EC 2.6.1.57) from Cucumis melo

27% id,
85% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

27% id,
71% cov

Q9C969: aromatic-amino-acid transaminase (EC 2.6.1.57) from Arabidopsis thaliana

22% id,
78% cov

panP GLOV_RS04720 Glov_0959 WP_012469032.1: putative pyridoxal-dependent aspartate 1-decarboxylase
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

24% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2828198-2829334 (frame -1) on NC_010814.1 Trichlorobacter lovleyi SZ, complete sequence
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

34% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory