Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichlorobacter lovleyi SZ (GCF_000020385.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Trichlorobacter lovleyi SZ, or try another query

GLOV_RS12540 Glov_2531 WP_012470577.1: aspartate kinase
is similar to:
PaperBLAST

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

63% id,
99% cov

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

61% id,
99% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

61% id,
99% cov

More...

GLOV_RS02785 Glov_0574 WP_012468657.1: aspartate kinase
is similar to:
PaperBLAST

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

52% id,
98% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

51% id,
98% cov

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

51% id,
98% cov

More...

GLOV_RS05970 Glov_1214 WP_012469284.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

31% id,
57% cov

pyrH GLOV_RS13420 Glov_2710 WP_012470752.1: UMP kinase
is similar to:
PaperBLAST

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

26% id,
51% cov

AK_YEAST / P10869: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Saccharomyces cerevisiae
P10869: aspartate kinase (EC 2.7.2.4) from Saccharomyces cerevisiae

25% id,
35% cov

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

32% id,
22% cov

More...

proB GLOV_RS04980 Glov_1011 WP_012469084.1: glutamate 5-kinase
is similar to:
PaperBLAST

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

23% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory