Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Trichlorobacter lovleyi SZ (GCF_000020385.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Trichlorobacter lovleyi SZ, or try another query

asnB GLOV_RS07415 Glov_1501 WP_012469560.1: asparagine synthase (glutamine-hydrolyzing) is similar to:	PaperBLAST
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	37% id, 61% cov
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis	34% id, 62% cov
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	32% id, 65% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	31% id, 64% cov
Asns / P49088: asparagine synthetase subunit (EC 6.3.5.4) from Rattus norvegicus	27% id, 67% cov
ASNS_MOUSE / Q61024: Asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Mus musculus	27% id, 67% cov
ASNS_HUMAN / P08243: Asparagine synthetase [glutamine-hydrolyzing]; Cell cycle control protein TS11; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Homo sapiens P08243: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Homo sapiens	27% id, 67% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana	27% id, 65% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	25% id, 65% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	41% id, 29% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	41% id, 28% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	40% id, 29% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	41% id, 28% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	41% id, 28% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	38% id, 30% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	36% id, 31% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	39% id, 29% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	36% id, 30% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	39% id, 28% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	38% id, 28% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	37% id, 28% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	28% id, 38% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	37% id, 28% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	37% id, 28% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	41% id, 25% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	40% id, 25% cov
F2CWZ7: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	40% id, 25% cov
Q84LA5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	40% id, 25% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	40% id, 25% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	39% id, 25% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana	39% id, 25% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	39% id, 25% cov
ASNS_MOUSE / Q61024: Asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Mus musculus	28% id, 34% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	38% id, 25% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	38% id, 25% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	28% id, 34% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	26% id, 35% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	26% id, 35% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	28% id, 31% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	26% id, 34% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	28% id, 31% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	28% id, 31% cov
F2CWZ7: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 31% cov
Q84LA5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 31% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	28% id, 31% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	27% id, 31% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	27% id, 31% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	27% id, 30% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	27% id, 30% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	24% id, 31% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	28% id, 24% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	26% id, 25% cov
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	33% id, 18% cov
Asns / P49088: asparagine synthetase subunit (EC 6.3.5.4) from Rattus norvegicus	32% id, 18% cov
ASNS_HUMAN / P08243: Asparagine synthetase [glutamine-hydrolyzing]; Cell cycle control protein TS11; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Homo sapiens P08243: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Homo sapiens	29% id, 18% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	44% id, 7% cov
More...

glmS GLOV_RS07470 Glov_1512 WP_012469570.1: glutamine--fructose-6-phosphate transaminase (isomerizing) is similar to:	PaperBLAST
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	34% id, 17% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	26% id, 21% cov

glmS GLOV_RS03960 Glov_0808 WP_012468890.1: glutamine--fructose-6-phosphate transaminase (isomerizing) is similar to:	PaperBLAST
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	32% id, 17% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	34% id, 10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory