Searching in Trichlorobacter lovleyi SZ (GCF_000020385.1)
Found 6 curated entries in PaperBLAST's database that match 'deoxy%ribonate transporter' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Trichlorobacter lovleyi SZ, or try another query
| GLOV_RS13150 Glov_2656 WP_012470700.1: nitrate/nitrite transporter is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 23% id, 95% cov |
PS417_07260: 2-deoxy-D-ribonate transporter 2 from Pseudomonas simiae | 27% id, 45% cov |
| GLOV_RS04395 Glov_0894 WP_012468969.1: MFS transporter is similar to: | PaperBLAST |
BWI76_RS23715: 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis | 22% id, 74% cov |
| GLOV_RS04610 Glov_0937 WP_012469010.1: MFS transporter is similar to: | PaperBLAST |
BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans | 24% id, 41% cov |
| GLOV_RS08095 Glov_1631 WP_012469689.1: DHA2 family efflux MFS transporter permease subunit is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 28% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2850861-2852120 (frame +3) on NC_010814.1 Trichlorobacter lovleyi SZ, complete sequence is similar to: | PaperBLAST |
BWI76_RS23725: 2-deoxy-D-ribonate transporter 2 from Klebsiella michiganensis | 23% id, 99% cov |
Lawrence Berkeley National Laboratory