Curated BLAST for Genomes

 

Curated BLAST

Searching in Chlorobaculum parvum NCIB 8327 (GCF_000020505.1)

Found 28 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Chlorobaculum parvum NCIB 8327, or try another query

CPAR_RS06230 Cpar_1230 WP_012502468.1: 3-deoxy-7-phosphoheptulonate synthase
is similar to:
PaperBLAST

AroG / b0754: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
aroG / P0AB91: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
C3TIE2: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli

56% id,
98% cov

AroF / b2601: 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive (EC 2.5.1.54) from Escherichia coli
aroF / P00888: 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive (EC 2.5.1.54) from Escherichia coli
P00888: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli

52% id,
100% cov

2-dehydro-3-deoxyphosphoheptonate aldolase / b1704: 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli
aroH / P00887: 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli

53% id,
97% cov

More...

kdsA CPAR_RS10115 Cpar_1996 WP_012503218.1: 3-deoxy-8-phosphooctulonate synthase
is similar to:
PaperBLAST

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

32% id,
85% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

33% id,
74% cov

P39912: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54); chorismate mutase (EC 5.4.99.5) from Bacillus subtilis

32% id,
65% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory