Curated BLAST for Genomes

 

Curated BLAST

Searching in Chlorobaculum parvum NCIB 8327 (GCF_000020505.1)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Chlorobaculum parvum NCIB 8327, or try another query

trpE CPAR_RS07835 Cpar_1545 WP_012502776.1: anthranilate synthase component I
is similar to:
PaperBLAST

TRPE_PSEAE / P20580: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas aeruginosa

46% id,
96% cov

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

46% id,
96% cov

TRPE_YEAST / P00899: Anthranilate synthase component 1; Anthranilate synthase component I; EC 4.1.3.27 from Saccharomyces cerevisiae

40% id,
90% cov

More...

pabB CPAR_RS02465 Cpar_0480 WP_012501735.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

32% id,
88% cov

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

35% id,
65% cov

TRPE_PSEAE / P20580: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas aeruginosa

36% id,
54% cov

More...

CPAR_RS01885 Cpar_0365 WP_232203923.1: isochorismate synthase
is similar to:
PaperBLAST

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

31% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory