Curated BLAST for Genomes

 

Curated BLAST

Searching in Chlorobaculum parvum NCIB 8327 (GCF_000020505.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Chlorobaculum parvum NCIB 8327, or try another query

trpE CPAR_RS07835 Cpar_1545 WP_012502776.1: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

44% id,
95% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

45% id,
91% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

43% id,
95% cov

More...

pabB CPAR_RS02465 Cpar_0480 WP_012501735.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

38% id,
58% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

36% id,
55% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

36% id,
55% cov

More...

CPAR_RS01885 Cpar_0365 WP_232203923.1: isochorismate synthase
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

27% id,
62% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

24% id,
68% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

23% id,
67% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory