Curated BLAST for Genomes

 

Curated BLAST

Searching in Chlorobaculum parvum NCIB 8327 (GCF_000020505.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%large' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Chlorobaculum parvum NCIB 8327, or try another query

ilvB CPAR_RS03240 Cpar_0634 WP_012501887.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

50% id,
93% cov

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

46% id,
99% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

46% id,
95% cov

More...

CPAR_RS07375 Cpar_1453 WP_012502684.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

30% id,
97% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

29% id,
92% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

29% id,
91% cov

More...

menD CPAR_RS01880 Cpar_0364 WP_012501621.1: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

23% id,
83% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

27% id,
31% cov

ILVX_MYCTU / O53554: Putative acetolactate synthase large subunit IlvX; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

27% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

677682-679598 (frame -2) on NC_011027.1 Chlorobaculum parvum NCIB 8327, complete sequence
is similar to:
PaperBLAST

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

49% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory