Curated BLAST for Genomes

 

Curated BLAST

Searching in Prosthecochloris aestuarii DSM 271 (GCF_000020625.1)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Prosthecochloris aestuarii DSM 271, or try another query

proC PAES_RS10560 Paes_2120 WP_012506656.1: pyrroline-5-carboxylate reductase
is similar to:		 PaperBLAST

P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa

 38% id,
99% cov

PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare

 39% id,
95% cov

G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula

 38% id,
96% cov

More...

PAES_RS10820 Paes_2174 WP_012506707.1: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
is similar to:		 PaperBLAST

Shew_1136: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Shewanella loihica

 31% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory