Curated BLAST for Genomes

 

Curated BLAST

Searching in Prosthecochloris aestuarii DSM 271 (GCF_000020625.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Prosthecochloris aestuarii DSM 271, or try another query

thrA PAES_RS01305 Paes_0264 WP_012504858.1: bifunctional aspartate kinase/homoserine dehydrogenase I
is similar to:
PaperBLAST

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

43% id,
100% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

42% id,
100% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

41% id,
99% cov

More...

lysC PAES_RS10835 Paes_2177 WP_012506710.1: lysine-sensitive aspartokinase 3
is similar to:
PaperBLAST

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

39% id,
100% cov

AK3_ECOLI / P08660: Lysine-sensitive aspartokinase 3; Aspartate kinase III; AKIII; Lysine-sensitive aspartokinase III; EC 2.7.2.4 from Escherichia coli
Apk / b4024: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
lysC / P08660: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
P08660: aspartate kinase (EC 2.7.2.4) from Escherichia coli

38% id,
99% cov

Q9RUL9: aspartate kinase (EC 2.7.2.4) from Deinococcus radiodurans

36% id,
96% cov

More...

lysA PAES_RS07495 Paes_1499 WP_012506052.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

31% id,
43% cov

pyrH PAES_RS09025 Paes_1808 WP_012506353.1: UMP kinase
is similar to:
PaperBLAST

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

22% id,
55% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

22% id,
54% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

26% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory