Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidithiobacillus ferrooxidans ATCC 23270 (GCF_000021485.1)

Found 11 curated entries in PaperBLAST's database that match '1.2.1.32' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Acidithiobacillus ferrooxidans ATCC 23270, or try another query

adh AFE_RS08085 AFE_1742 WP_012607209.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

38% id,
100% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

37% id,
98% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

37% id,
98% cov

More...

AFE_RS09825 AFE_2131 WP_012536996.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

38% id,
99% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

37% id,
98% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

37% id,
96% cov

More...

AFE_RS07230 AFE_1546 WP_012536595.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

35% id,
98% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

34% id,
99% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

33% id,
97% cov

More...

AFE_RS04455 AFE_0951 WP_225487653.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

28% id,
87% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

25% id,
88% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

28% id,
69% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory