Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidithiobacillus ferrooxidans ATCC 23270 (GCF_000021485.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%small' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Acidithiobacillus ferrooxidans ATCC 23270, or try another query

ilvN AFE_RS03535 AFE_0746 WP_012606634.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

ilvN / O08354: acetohydroxy-acid synthase small subunit (EC 2.2.1.6) from Methanococcus aeolicus

44% id,
95% cov

ILVH_MYCTU / P9WKJ3: Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis

40% id,
95% cov

ILVH_NICPL / Q9SMC2: Acetolactate synthase small subunit 1, chloroplastic; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Nicotiana plumbaginifolia

37% id,
33% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory