Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurihydrogenibium azorense Az-Fu1 (GCF_000021545.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sulfurihydrogenibium azorense Az-Fu1, or try another query

dnaX SULAZ_RS05730 SULAZ_1171 WP_012674331.1: DNA polymerase III subunit gamma/tau
is similar to:
PaperBLAST

RR42_RS06130: Gluconokinase (EC 2.7.1.12) from Cupriavidus basilensis

27% id,
88% cov

SULAZ_RS00905 SULAZ_0186 WP_012674291.1: shikimate kinase
is similar to:
PaperBLAST

RR42_RS06130: Gluconokinase (EC 2.7.1.12) from Cupriavidus basilensis

43% id,
26% cov

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

42% id,
22% cov

cmk SULAZ_RS00475 SULAZ_0098 WP_012673522.1: (d)CMP kinase
is similar to:
PaperBLAST

Q10242: gluconokinase (EC 2.7.1.12) from Schizosaccharomyces pombe

55% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory