Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurihydrogenibium azorense Az-Fu1 (GCF_000021545.1)

Found 11 curated entries in PaperBLAST's database that match '6.2.1.16' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sulfurihydrogenibium azorense Az-Fu1, or try another query

acs SULAZ_RS07510 SULAZ_1536 WP_012674072.1: acetate--CoA ligase
is similar to:
PaperBLAST

aacS / D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans
D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

29% id,
92% cov

SUR5_CAEEL / Q21166: Acetoacetyl-CoA synthetase; Suppressor of activated let-60 Ras protein 5; EC 6.2.1.16 from Caenorhabditis elegans

26% id,
91% cov

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

24% id,
97% cov

More...

acs SULAZ_RS07040 SULAZ_1440 WP_012673534.1: acetate--CoA ligase
is similar to:
PaperBLAST

aacS / D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans
D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

28% id,
93% cov

AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti
SMc00774: Acetoacetate--CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Q9Z3R3: acetoacetate-CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti

28% id,
94% cov

AACS_HUMAN / Q86V21: Acetoacetyl-CoA synthetase; Acyl-CoA synthetase family member 1; Protein sur-5 homolog; EC 6.2.1.16 from Homo sapiens

26% id,
92% cov

More...

SULAZ_RS04300 SULAZ_0882 WP_012673712.1: AMP-binding protein
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

28% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory