Curated BLAST for Genomes

 

Curated BLAST

Searching in Persephonella marina EX-H1 (GCF_000021565.1)

Found 7 curated entries in PaperBLAST's database that match '1.1.3.2' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Persephonella marina EX-H1, or try another query

guaB PERMA_RS01105 PERMA_0224 WP_012675886.1: IMP dehydrogenase
is similar to:
PaperBLAST

Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp.

33% id,
23% cov

F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii

52% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory