Searching in Persephonella marina EX-H1 (GCF_000021565.1)
Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Persephonella marina EX-H1, or try another query
| PERMA_RS06960 PERMA_1404 WP_012676579.1: shikimate kinase is similar to: | PaperBLAST |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 39% id, 93% cov |
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli | 37% id, 94% cov |
AROK_HELPY / P56073: Shikimate kinase; SK; EC 2.7.1.71 from Helicobacter pylori | 38% id, 91% cov |
| lon PERMA_RS05765 PERMA_1161 WP_012676472.1: endopeptidase La is similar to: | PaperBLAST |
AROL_DICCH / P10880: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Dickeya chrysanthemi | 28% id, 83% cov |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 25% id, 91% cov |
| hslU PERMA_RS02985 PERMA_0598 WP_012675893.1: ATP-dependent protease ATPase subunit HslU is similar to: | PaperBLAST |
CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus | 36% id, 33% cov |
| cmk PERMA_RS00745 PERMA_0150 WP_012676511.1: (d)CMP kinase is similar to: | PaperBLAST |
AROL_DICCH / P10880: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Dickeya chrysanthemi | 39% id, 28% cov |
SK1_ORYSJ / Q5NTH4: Shikimate kinase 1, chloroplastic; OsSK1; EC 2.7.1.71 from Oryza sativa | 27% id, 40% cov |
SK2_ORYSJ / Q5NTH3: Shikimate kinase 2, chloroplastic; OsSK2; EC 2.7.1.71 from Oryza sativa | 26% id, 40% cov |
| aroA PERMA_RS08540 PERMA_1722 WP_012676333.1: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 30% id, 27% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 30% id, 27% cov |
| aroE PERMA_RS05330 PERMA_1072 WP_012676742.1: shikimate dehydrogenase is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 30% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1325436-1326098 (frame -2) on NC_012440.1 Persephonella marina EX-H1, complete sequence is similar to: | PaperBLAST |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 38% id, 96% cov |
SK1_ORYSJ / Q5NTH4: Shikimate kinase 1, chloroplastic; OsSK1; EC 2.7.1.71 from Oryza sativa | 37% id, 59% cov |
Lawrence Berkeley National Laboratory