Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocella silvestris BL2 (GCF_000021745.1)

Found 28 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylocella silvestris BL2, or try another query

MSIL_RS00640 Msil_0124 WP_012589176.1: 3-deoxy-7-phosphoheptulonate synthase class II
is similar to:
PaperBLAST

AROG2_PETHY / A0A067XGX8: Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2; DAHP synthase 2; PhDAHP2; Phospho-2-keto-3-deoxyheptonate aldolase 2; EC 2.5.1.54 from Petunia hybrida

59% id,
88% cov

P29976: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Arabidopsis thaliana

56% id,
85% cov

A0A0D5ZBC4: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Gossypium hirsutum

57% id,
83% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory