Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocella silvestris BL2 (GCF_000021745.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylocella silvestris BL2, or try another query

MSIL_RS03150 Msil_0618 WP_012589660.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

54% id,
99% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

53% id,
95% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

32% id,
97% cov

More...

MSIL_RS00835 Msil_0161 WP_244406190.1: glucokinase
is similar to:
PaperBLAST

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

36% id,
97% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

35% id,
94% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

31% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory