Searching in Methylocella silvestris BL2 (GCF_000021745.1)
Found 11 curated entries in PaperBLAST's database that match '4.1.1.48' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Methylocella silvestris BL2, or try another query
| trpC MSIL_RS02560 Msil_0503 WP_012589545.1: indole-3-glycerol phosphate synthase TrpC is similar to: | PaperBLAST |
A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis | 37% id, 98% cov |
P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus | 44% id, 82% cov |
trpC / Q9YGB5: indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermococcus kodakarensis | 39% id, 88% cov |
| MSIL_RS05940 Msil_1153 WP_012590192.1: indole-3-glycerol-phosphate synthase is similar to: | PaperBLAST |
P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus | 33% id, 100% cov |
A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis | 35% id, 95% cov |
trpC / Q56319: indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermotoga maritima | 30% id, 82% cov |
| MSIL_RS02570 Msil_0505 WP_012589547.1: aminodeoxychorismate/anthranilate synthase component II is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 42% id, 41% cov |
| MSIL_RS12245 Msil_2397 WP_012591396.1: aminodeoxychorismate/anthranilate synthase component II is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 43% id, 38% cov |
| MSIL_RS00750 Msil_0146 WP_012589197.1: phosphoribosylanthranilate isomerase is similar to: | PaperBLAST |
TrpC / b1262: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli | 34% id, 43% cov |
| carA MSIL_RS08265 Msil_1622 WP_244406238.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 30% id, 39% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 559465-560340 (frame -2) on NC_011666.1 Methylocella silvestris BL2, complete sequence is similar to: | PaperBLAST |
A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis | 37% id, 100% cov |
| 561352-562005 (frame -2) on NC_011666.1 Methylocella silvestris BL2, complete sequence is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 41% id, 43% cov |
Lawrence Berkeley National Laboratory