Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocella silvestris BL2 (GCF_000021745.1)

Found 22 curated entries in PaperBLAST's database that match 'argininosuccinate lyase' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylocella silvestris BL2, or try another query

argH MSIL_RS06120 Msil_1188 WP_012590227.1: argininosuccinate lyase
is similar to:
PaperBLAST

argH / BAC65282.1: argininosuccinate lyase from Burkholderia multivorans

53% id,
98% cov

2e9fB / Q5SLL0: Crystal structure of t.Th.Hb8 argininosuccinate lyase complexed with l-arginine

52% id,
98% cov

1tj7B / P11447: Structure determination and refinement at 2.44 a resolution of argininosuccinate lyase from e. Coli

51% id,
98% cov

More...

purB MSIL_RS05640 Msil_1095 WP_012590134.1: adenylosuccinate lyase
is similar to:
PaperBLAST

Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans

26% id,
75% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory