Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfitobacterium hafniense DCB-2 (GCF_000021925.1)

Found 51 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 26 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

DHAF_RS22800 Dhaf_4566 WP_015945310.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

24% id,
73% cov

DHAF_RS04325 Dhaf_0860 WP_015943065.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

24% id,
70% cov

lpdA DHAF_RS20325 Dhaf_4074 WP_005809814.1: dihydrolipoyl dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

26% id,
65% cov

DHAF_RS04280 Dhaf_0851 WP_011461849.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

22% id,
70% cov

DHAF_RS22975 Dhaf_4602 WP_015945338.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

26% id,
56% cov

DHAF_RS22650 Dhaf_4536 WP_015945290.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
47% cov

DHAF_RS13220 Dhaf_2634 WP_015944133.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

27% id,
45% cov

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

27% id,
46% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

26% id,
45% cov

More...

DHAF_RS08105 Dhaf_1624 WP_015943554.1: FAD-binding protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
46% cov

DHAF_RS10840 Dhaf_2181 WP_015943905.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

24% id,
40% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

23% id,
40% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

23% id,
40% cov

More...

DHAF_RS03915 Dhaf_0777 WP_015943027.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

33% id,
25% cov

DHAF_RS18810 Dhaf_3768 WP_015944771.1: flavocytochrome c
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

32% id,
25% cov

DHAF_RS19775 Dhaf_3960 WP_242659902.1: FAD-binding protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

32% id,
25% cov

DHAF_RS08270 Dhaf_1658 WP_041271937.1: FAD-binding protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
29% cov

DHAF_RS12580 Dhaf_2538 WP_015944082.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

31% id,
24% cov

DHAF_RS08275 Dhaf_1659 WP_015943578.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

38% id,
17% cov

DHAF_RS15680 Dhaf_3145 WP_018305879.1: pyridine nucleotide-disulfide oxidoreductase/dicluster-binding protein
is similar to:
PaperBLAST

Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

37% id,
16% cov

pylC DHAF_RS24190 Dhaf_4856 WP_011462268.1: 3-methylornithine--L-lysine ligase PylC
is similar to:
PaperBLAST

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

33% id,
18% cov

DHAF_RS20105 Dhaf_4030 WP_193345573.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
20% cov

DHAF_RS05530 Dhaf_1103 WP_015943203.1: FAD-binding protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

31% id,
17% cov

DHAF_RS10945 Dhaf_2203 WP_015943918.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

35% id,
15% cov

DHAF_RS22985 Dhaf_4604 WP_015945340.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M73: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

54% id,
9% cov

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

51% id,
9% cov

DHAF_RS03925 Dhaf_0779 WP_015943029.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

41% id,
12% cov

DHAF_RS14890 Dhaf_2984 WP_015944317.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

50% id,
10% cov

DHAF_RS05125 Dhaf_1023 WP_015943154.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

49% id,
9% cov

DHAF_RS13875 Dhaf_2774 WP_005811677.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

44% id,
9% cov

DHAF_RS10230 Dhaf_2057 WP_242659967.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

49% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory