Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfitobacterium hafniense DCB-2 (GCF_000021925.1)

Found 64 curated entries in PaperBLAST's database that match '2.4.2.1' as complete word(s).

These curated entries have 45 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

DHAF_RS17210 Dhaf_3448 WP_005811031.1: purine-nucleoside phosphorylase
is similar to:		 PaperBLAST

A0A3G5E8S8: purine-nucleoside phosphorylase (EC 2.4.2.1) from Aneurinibacillus migulanus

 61% id,
99% cov

PUNA_GEOSE / P77834: Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC 2.4.2.1 from Geobacillus stearothermophilus
P77834: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus

 61% id,
97% cov

Q72L69: purine-nucleoside phosphorylase (EC 2.4.2.1) from Thermus thermophilus

 47% id,
100% cov

More...

mtnP DHAF_RS18800 Dhaf_3766 WP_015944769.1: S-methyl-5'-thioadenosine phosphorylase
is similar to:		 PaperBLAST

PNPH_PYRFU / Q8U2I1: 6-oxopurine nucleoside phosphorylase; Purine nucleoside phosphorylase; PNP; PfPNP; EC 2.4.2.1 from Pyrococcus furiosus
Q8U2I1: purine-nucleoside phosphorylase (EC 2.4.2.1) from Pyrococcus furiosus

 50% id,
96% cov

PNPH_THEKO / Q5JJB8: Probable 6-oxopurine nucleoside phosphorylase; Purine nucleoside phosphorylase; PNP; EC 2.4.2.1 from Thermococcus kodakarensis

 49% id,
96% cov

pnp / Q5JEQ6: adenosine phosphorylase (EC 2.4.2.1) from Thermococcus kodakarensis

 44% id,
95% cov

More...

tpiA DHAF_RS23525 Dhaf_4717 WP_015945416.1: triose-phosphate isomerase
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 45% id,
96% cov

pgeF DHAF_RS20205 Dhaf_4051 WP_015944986.1: peptidoglycan editing factor PgeF
is similar to:		 PaperBLAST

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus

 45% id,
92% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

 36% id,
89% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

 33% id,
93% cov

More...

DHAF_RS17220 Dhaf_3449 WP_005811028.1: phosphopentomutase
is similar to:		 PaperBLAST

A0A518Y5Z2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori

 44% id,
63% cov

DHAF_RS13225 Dhaf_2635 WP_015944134.1: triose-phosphate isomerase
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 26% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory