Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfitobacterium hafniense DCB-2 (GCF_000021925.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

glk DHAF_RS15840 Dhaf_3171 WP_049769578.1: glucokinase
is similar to:
PaperBLAST

A0A3G4RI75: glucokinase (EC 2.7.1.2) from Methylomonas methanica

42% id,
98% cov

G4T1H4: glucokinase (EC 2.7.1.2) from Methylotuvimicrobium alcaliphilum

39% id,
98% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

34% id,
98% cov

More...

DHAF_RS20520 Dhaf_4114 WP_015945030.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

29% id,
98% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

28% id,
98% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
100% cov

More...

DHAF_RS21585 Dhaf_4322 WP_015945168.1: ASKHA domain-containing protein
is similar to:
PaperBLAST

PPGK_MYCTA / A5U654: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis
PPGK_MYCTU / P9WIN1: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis

24% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory