Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfitobacterium hafniense DCB-2 (GCF_000021925.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

DHAF_RS19110 Dhaf_3826 WP_015944823.1: acetate kinase
is similar to:
PaperBLAST

P0CW04: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei

62% id,
97% cov

P0CW05: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei

62% id,
97% cov

ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima
ackA / PDB|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima
Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima

60% id,
99% cov

More...

DHAF_RS24235 Dhaf_4865 WP_011462276.1: EutP/PduV family microcompartment system protein
is similar to:
PaperBLAST

EUTP_SALTY / P0A208: Probable acetate kinase EutP; Ethanolamine utilization protein EutP; EC 2.7.2.1 from Salmonella typhimurium

33% id,
92% cov

DHAF_RS01870 Dhaf_0359 WP_015942718.1: ethanolamine utilization protein EutQ
is similar to:
PaperBLAST

EUTQ_CLOD6 / Q187N7: Acetate kinase EutQ; Ethanolamine utilization protein EutQ; EC 2.7.2.1 from Clostridioides difficile

32% id,
88% cov

EUTQ_SALTY / Q9ZFV5: Acetate kinase EutQ; Ethanolamine utilization protein EutQ; EC 2.7.2.1 from Salmonella typhimurium

27% id,
97% cov

buk DHAF_RS17680 Dhaf_3544 WP_015944651.1: butyrate kinase
is similar to:
PaperBLAST

ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima
ackA / PDB|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima
Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima

27% id,
83% cov

YhaA / b3115: propionate kinase (EC 2.7.2.7; EC 2.7.2.1; EC 2.7.2.15; EC 2.7.2.14) from Escherichia coli

26% id,
55% cov

G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum

33% id,
39% cov

More...

DHAF_RS13630 Dhaf_2721 WP_015944188.1: D-alanine--D-alanine ligase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

26% id,
38% cov

DHAF_RS11145 Dhaf_2246 WP_011459544.1: ABC transporter ATP-binding protein
is similar to:
PaperBLAST

EUTP_SALTY / P0A208: Probable acetate kinase EutP; Ethanolamine utilization protein EutP; EC 2.7.2.1 from Salmonella typhimurium

56% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory