Curated BLAST

Curated BLAST for Genomes

Found 12 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

DHAF_RS16340 Dhaf_3275 WP_011460067.1: UxaA family hydrolase is similar to:	PaperBLAST
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans	38% id, 91% cov

DHAF_RS22085 Dhaf_4418 WP_005816968.1: UxaA family hydrolase is similar to:	PaperBLAST
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans	34% id, 73% cov

DHAF_RS10200 Dhaf_2051 WP_005814041.1: UxaA family hydrolase is similar to:	PaperBLAST
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans	34% id, 73% cov

DHAF_RS22090 Dhaf_4419 WP_005816969.1: UxaA family hydrolase is similar to:	PaperBLAST
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans	32% id, 75% cov

DHAF_RS16335 Dhaf_3274 WP_005812779.1: UxaA family hydrolase is similar to:	PaperBLAST
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans	31% id, 75% cov

DHAF_RS10195 Dhaf_2050 WP_005814039.1: UxaA family hydrolase is similar to:	PaperBLAST
BPHYT_RS34235: putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans	35% id, 49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory