Curated BLAST

Curated BLAST for Genomes

Found 20 curated entries in PaperBLAST's database that match '5.4.2.7' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

DHAF_RS17220 Dhaf_3449 WP_005811028.1: phosphopentomutase is similar to:	PaperBLAST
Q9WY14: phosphopentomutase (EC 5.4.2.7) from Thermotoga maritima	62% id, 98% cov
Q818Z9: phosphopentomutase (EC 5.4.2.7) from Bacillus cereus	54% id, 98% cov
B3ITC5: phosphopentomutase (EC 5.4.2.7) from Lysinibacillus sphaericus	52% id, 97% cov
SO1219: Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis	49% id, 100% cov
DEOB_ECOLI / P0A6K6: Phosphopentomutase; Phosphodeoxyribomutase; Phosphoribomutase; EC 5.4.2.7 from Escherichia coli Tlr / b4383: phosphopentomutase (EC 5.4.2.7) from Escherichia coli deoB / RF\|NP_418800: phosphopentomutase; EC 5.4.2.7 from Escherichia coli deoB: phosphopentomutase; EC 5.4.2.7 from Escherichia coli deoB / P0A6K6: phosphopentomutase (EC 5.4.2.7) from Escherichia coli P0A6K6: phosphopentomutase (EC 5.4.2.7) from Escherichia coli	49% id, 100% cov
DEOB_STRR6 / Q8DQD0: Phosphopentomutase; Phosphodeoxyribomutase; EC 5.4.2.7 from Streptococcus pneumoniae	47% id, 99% cov
DEOB_STRMU / Q8DTU0: Phosphopentomutase; Phosphodeoxyribomutase; EC 5.4.2.7 from Streptococcus mutans	47% id, 99% cov
Dshi_0829: Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae	47% id, 100% cov
More...

DHAF_RS14085 Dhaf_2815 WP_015944244.1: phospho-sugar mutase is similar to:	PaperBLAST
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe	34% id, 97% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	34% id, 92% cov
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens	34% id, 91% cov
PGM3_YEAST / Q03262: Phosphoribomutase; PRM; Phosphoglucomutase 3; PGM 3; EC 5.4.2.7 from Saccharomyces cerevisiae	34% id, 74% cov
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis	28% id, 65% cov
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glmM DHAF_RS04205 Dhaf_0835 WP_011461863.1: phosphoglucosamine mutase is similar to:	PaperBLAST
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis Q6I7B6: phosphopentomutase (EC 5.4.2.7) from Thermococcus kodakarensis	32% id, 99% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	26% id, 60% cov
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens	28% id, 24% cov
PGM3_YEAST / Q03262: Phosphoribomutase; PRM; Phosphoglucomutase 3; PGM 3; EC 5.4.2.7 from Saccharomyces cerevisiae	29% id, 23% cov
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe	29% id, 20% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory