Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfitobacterium hafniense DCB-2 (GCF_000021925.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

DHAF_RS21850 Dhaf_4375 WP_015945186.1: anthranilate synthase component I family protein
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

52% id,
64% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

39% id,
76% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

47% id,
62% cov

More...

pabB DHAF_RS22210 Dhaf_4443 WP_015945221.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

44% id,
62% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

42% id,
62% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

43% id,
55% cov

More...

DHAF_RS19785 Dhaf_3962 WP_041272128.1: salicylate synthase
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

32% id,
79% cov

trpE: anthranilate synthase component I; EC 4.1.3.27 from Leptospira biflexa

30% id,
69% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

32% id,
55% cov

More...

DHAF_RS02425 Dhaf_0469 WP_005810068.1: isochorismate synthase
is similar to:
PaperBLAST

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

27% id,
62% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

27% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory