Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfitobacterium hafniense DCB-2 (GCF_000021925.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%small' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfitobacterium hafniense DCB-2, or try another query

ilvN DHAF_RS12315 Dhaf_2483 WP_005816731.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

ilvN / O08354: acetohydroxy-acid synthase small subunit (EC 2.2.1.6) from Methanococcus aeolicus

51% id,
92% cov

ILVH_MYCTU / P9WKJ3: Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis

47% id,
92% cov

ILV6_YEAST / P25605: Acetolactate synthase small subunit, mitochondrial; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Saccharomyces cerevisiae

47% id,
33% cov

More...

ilvN DHAF_RS18020 Dhaf_3616 WP_005810756.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

ILVH_MYCTU / P9WKJ3: Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis

49% id,
93% cov

ilvN / O08354: acetohydroxy-acid synthase small subunit (EC 2.2.1.6) from Methanococcus aeolicus

47% id,
93% cov

ILVH2_ARATH / Q9FFF4: Acetolactate synthase small subunit 2, chloroplastic; ALS-interacting protein 3; Acetohydroxy-acid synthase small subunit 2; Protein valine-tolerant 1 from Arabidopsis thaliana

48% id,
32% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory