Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylobacterium nodulans ORS 2060 (GCF_000022085.1)

Found 37 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Methylobacterium nodulans ORS 2060, or try another query

nagA MNOD_RS07690 Mnod_1600 WP_015928285.1: N-acetylglucosamine-6-phosphate deacetylase
is similar to:
PaperBLAST

CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus

50% id,
97% cov

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

46% id,
98% cov

Shew_1117: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella loihica

44% id,
99% cov

More...

MNOD_RS07465 Mnod_1549 WP_015928236.1: amidohydrolase family protein
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

26% id,
36% cov

ade MNOD_RS01890 Mnod_0385 WP_015927138.1: adenine deaminase
is similar to:
PaperBLAST

BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Burkholderia phytofirmans

34% id,
19% cov

MNOD_RS39215 Mnod_7944 WP_012631150.1: dihydroorotase family protein
is similar to:
PaperBLAST

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

27% id,
23% cov

MNOD_RS03360 Mnod_0692 WP_015927429.1: dihydroorotase
is similar to:
PaperBLAST

A0A3E2N0G4: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Mycobacterium marinum

51% id,
11% cov

MNOD_RS39170 Mnod_7934 WP_157091832.1: amidohydrolase family protein
is similar to:
PaperBLAST

SO3505: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis

39% id,
13% cov

Shewana3_3112: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.

39% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory