Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylobacterium nodulans ORS 2060 (GCF_000022085.1)

Found 14 curated entries in PaperBLAST's database that match '3.5.1.68' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylobacterium nodulans ORS 2060, or try another query

hutG MNOD_RS04995 Mnod_1037 WP_015927743.1: N-formylglutamate deformylase
is similar to:
PaperBLAST

Ga0059261_3962: N-formylglutamate deformylase (EC 3.5.1.68) from Sphingomonas koreensis

57% id,
99% cov

PGA1_c36330: N-formylglutamate deformylase (EC 3.5.1.68) from Phaeobacter inhibens

51% id,
96% cov

SM_b21164: N-formylglutamate deformylase (EC 3.5.1.68) from Sinorhizobium meliloti

51% id,
92% cov

More...

MNOD_RS28130 Mnod_5950 WP_015932372.1: N-formylglutamate amidohydrolase
is similar to:
PaperBLAST

BPHYT_RS07585: N-formylglutamate deformylase (EC 3.5.1.68) from Burkholderia phytofirmans

33% id,
96% cov

Ga0059261_3962: N-formylglutamate deformylase (EC 3.5.1.68) from Sphingomonas koreensis

30% id,
97% cov

Pf1N1B4_1578: N-formylglutamate deformylase (EC 3.5.1.68) from Pseudomonas fluorescens

32% id,
83% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory