Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylobacterium nodulans ORS 2060 (GCF_000022085.1)

Found 11 curated entries in PaperBLAST's database that match '5.3.1.30' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylobacterium nodulans ORS 2060, or try another query

iolB MNOD_RS38620 Mnod_7801 WP_043753892.1: 5-deoxy-glucuronate isomerase
is similar to:
PaperBLAST

SMc00432: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Sinorhizobium meliloti

56% id,
100% cov

AO353_21345: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens

49% id,
97% cov

AO356_23170: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Pseudomonas fluorescens

48% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory