Curated BLAST for Genomes

 

Curated BLAST

Searching in Geotalea daltonii FRC-32 (GCF_000022265.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.2.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Geotalea daltonii FRC-32, or try another query

purT GEOB_RS06195 Geob_1242 WP_012646331.1: formate-dependent phosphoribosylglycinamide formyltransferase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

60% id,
99% cov

GEOB_RS08075 Geob_1624 WP_041267424.1: acetate kinase
is similar to:
PaperBLAST

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

51% id,
100% cov

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

48% id,
99% cov

AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli
ackA / P0A6A3: acetate kinase (EC 2.7.2.15; EC 2.7.2.7) from Escherichia coli

44% id,
98% cov

More...

GEOB_RS09010 Geob_1812 WP_012646899.1: acetate kinase
is similar to:
PaperBLAST

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

47% id,
99% cov

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

44% id,
99% cov

PDUW_SALTY / P74879: Propionate kinase PduW; EC 2.7.2.15 from Salmonella typhimurium

42% id,
96% cov

More...

buk GEOB_RS00715 Geob_0146 WP_012645249.1: butyrate kinase
is similar to:
PaperBLAST

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

24% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory