Curated BLAST for Genomes

 

Curated BLAST

Searching in Brucella microti CCM 4915 (GCF_000022745.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Brucella microti CCM 4915, or try another query

BMI_RS06965 BMI_I1510 WP_002964601.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

 84% id,
100% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 70% id,
100% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

 59% id,
96% cov

More...

BMI_RS07840 BMI_I1707 WP_002964776.1: phosphoserine transaminase
is similar to:		 PaperBLAST

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans

 64% id,
100% cov

BMI_RS05950 BMI_I1286 WP_004688478.1: LL-diaminopimelate aminotransferase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 45% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 34% id,
99% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 31% id,
98% cov

More...

hisC BMI_RS09200 BMI_I2010 WP_002965053.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 36% id,
99% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

 25% id,
75% cov

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

 29% id,
52% cov

BMI_RS04245 BMI_I910 WP_004688288.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 34% id,
98% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 31% id,
98% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

 32% id,
96% cov

More...

BMI_RS02950 BMI_I634 WP_004689567.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 31% id,
96% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 24% id,
60% cov

BMI_RS13175 BMI_II664 WP_002965970.1: branched-chain amino acid aminotransferase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 28% id,
94% cov

BMI_RS14405 BMI_II928 WP_004687087.1: D-amino-acid transaminase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 26% id,
91% cov

BMI_RS06425 BMI_I1388 WP_004686380.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

 23% id,
90% cov

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

 25% id,
60% cov

cobD BMI_RS06060 BMI_I1308 WP_002964413.1: threonine-phosphate decarboxylase CobD
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 24% id,
83% cov

BMI_RS02420 BMI_I523 WP_004688088.1: DegT/DnrJ/EryC1/StrS aminotransferase family protein
is similar to:		 PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 32% id,
34% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 30% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory