Curated BLAST for Genomes

 

Curated BLAST

Searching in Brucella microti CCM 4915 (GCF_000022745.1)

Found 7 curated entries in PaperBLAST's database that match '3.3.2.12' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Brucella microti CCM 4915, or try another query

BMI_RS15215 BMI_II1088 WP_002965570.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
98% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
98% cov

BMI_RS11120 BMI_II219 WP_002968290.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

30% id,
100% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

30% id,
100% cov

BMI_RS10105 BMI_I2205 WP_002965246.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

32% id,
95% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

32% id,
95% cov

BMI_RS09460 BMI_I2068 WP_002965109.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

25% id,
92% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

25% id,
92% cov

BMI_RS14280 BMI_II902 WP_004682297.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

25% id,
69% cov

HSERO_RS20590: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91) from Herbaspirillum seropedicae

29% id,
52% cov

BMI_RS13195 BMI_II669 WP_008934632.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

23% id,
74% cov

BMI_RS03520 BMI_I756 WP_004683558.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

27% id,
52% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

27% id,
52% cov

BMI_RS01715 BMI_I372 WP_012783876.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

HSERO_RS20590: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91) from Herbaspirillum seropedicae

21% id,
57% cov

putA BMI_RS13420 BMI_II715 WP_004689056.1: trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

24% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory