Curated BLAST for Genomes

 

Curated BLAST

Searching in Teredinibacter turnerae T7901 (GCF_000023025.1)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Teredinibacter turnerae T7901, or try another query

asd TERTU_RS11080 TERTU_2499 WP_015818862.1: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

DHAS_PSEAE / Q51344: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Pseudomonas aeruginosa

73% id,
99% cov

DHAS1_VIBCH / Q9KQG2: Aspartate-semialdehyde dehydrogenase 1; ASA dehydrogenase 1; ASADH 1; Aspartate-beta-semialdehyde dehydrogenase 1; EC 1.2.1.11 from Vibrio cholerae
asd / Q9KQG2: aspartate-β-semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Vibrio cholerae
Q9KQG2: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Vibrio cholerae

71% id,
99% cov

DHAS_HAEIN / P44801: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Haemophilus influenzae
P44801: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Haemophilus influenzae

69% id,
99% cov

More...

argC TERTU_RS13580 TERTU_3064 WP_012779335.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

DHAS_METJA / Q57658: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Methanocaldococcus jannaschii
asd / Q57658: aspartate-semialdehyde dehydrogenase monomer (EC 1.2.1.11) from Methanocaldococcus jannaschii

26% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory