Curated BLAST for Genomes

 

Curated BLAST

Searching in Teredinibacter turnerae T7901 (GCF_000023025.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Teredinibacter turnerae T7901, or try another query

galK TERTU_RS10220 TERTU_2307 WP_015818959.1: galactokinase
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

52% id,
98% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

49% id,
97% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

46% id,
91% cov

glk TERTU_RS12940 TERTU_2931 WP_015819474.1: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

42% id,
97% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

38% id,
98% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

33% id,
97% cov

More...

TERTU_RS12910 TERTU_2924 WP_015820817.1: ROK family protein
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

33% id,
99% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

33% id,
58% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

33% id,
57% cov

More...

TERTU_RS14805 TERTU_3342 WP_015820092.1: ROK family protein
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

37% id,
60% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

34% id,
57% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

31% id,
63% cov

More...

mvaD TERTU_RS14350 TERTU_3245 WP_015817654.1: diphosphomevalonate decarboxylase
is similar to:
PaperBLAST

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

41% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory